Medicago truncatula BLAST

This form is the interface to NCBI BLAST v2.2.27+ for searching against Mt4.0 or Mt3.5 assemblies, CDS sequences or peptides. For help using BLAST, please visit the NCBI website. To view the results in CViT, please use the BLAST tool on the archived web site.

You can use these sample nucleotide and protein sequences for testing.

Mt4.0 Mt3.5

  • Highly similar sequences (megablast)
  • More dissimilar sequences (discontent-megablast)
  • Somewhat similar sequences (blastn)

(Input file size is limited to 10KB)

Site hosted by: Nevin Young's Lab at University of Minnesota. Managed By: Joseph Guhlin

Primary Collaborators: INRA - Montpellier | ENSAT - Toulouse | Noble Foundation

Co-Principal Investigators: University of Minnesota N. Young, P. Tiffin, M. Sadowsky, B. Stupar, K. Silverstein | NCGR J. Mudge, A. Farmer

Boyce Thompson Institute M. Harrison | Hamline University B. Martinez-Vaz