Medicago truncatula de novo sequenced accessions BLAST

This form is the interface to NCBI BLAST v2.2.27+ for searching against the M. truncatula de novo Assemblies (Updated Feb 2016) assembly. This form returns 1000bp of flanking region for each result. For help using BLAST, please visit the NCBI website. This form does not accept multiple sequences for BLAST searches.

Please see the README file for the de novo assemblies. These assemblies are released in accordance with the Toronto Agreement.

  • Highly similar sequences (megablast)
  • More dissimilar sequences (discontent-megablast)
  • Somewhat similar sequences (blastn)

(Input file size is limited to 10KB)

Site hosted by: Nevin Young's Lab at University of Minnesota. Managed By: Joseph Guhlin

Primary Collaborators: INRA - Montpellier | ENSAT - Toulouse | Noble Foundation

Co-Principal Investigators: University of Minnesota N. Young, P. Tiffin, M. Sadowsky, B. Stupar, K. Silverstein | NCGR J. Mudge, A. Farmer

Boyce Thompson Institute M. Harrison | Hamline University B. Martinez-Vaz